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enzyme (lysozyme)

 
Enzymes
  Enzyme classes:
  EC 1: Oxidoreductases
  EC 2: Transferases
  EC 3: Hydrolases
  EC 4: Lyases
  EC 5: Isomerases
    EC 5.1
    EC 5.2
    EC 5.3
      EC 5.3.1
        EC 5.3.1.1
        EC 5.3.1.2
        EC 5.3.1.3
        EC 5.3.1.4
        EC 5.3.1.5
        EC 5.3.1.6
        EC 5.3.1.7
        EC 5.3.1.8
        EC 5.3.1.9
        EC 5.3.1.10
        EC 5.3.1.11
        EC 5.3.1.12
        EC 5.3.1.13
        EC 5.3.1.14
        EC 5.3.1.15
        EC 5.3.1.16
        EC 5.3.1.17
        EC 5.3.1.18
        EC 5.3.1.19
        EC 5.3.1.20
        EC 5.3.1.21
        EC 5.3.1.22
        EC 5.3.1.23
        EC 5.3.1.24
        EC 5.3.1.25
        EC 5.3.1.26
      EC 5.3.2
      EC 5.3.3
      EC 5.3.4
      EC 5.3.99
    EC 5.4
    EC 5.5
    EC 5.99
  EC 6: Ligases
  General information:
  Catalytic mechanism
  Enzyme kinetics
  Inhibitors
  Enzymes in industry

EC 5.3.1.5 - D- xylose aldose- ketose- isomerase (xylose isomerase)



3D structures of EC 5.3.1.5 - xylose isomerase in Protein Data Bank

updated: 22 January 2020, 1:42

In total: 158 PDB structures of EC 5.3.1.5 - xylose isomerase:
  1. 1a0c: Xylose Isomerase from Thermoanaerobacterium Thermosulfurigenes
  2. 1a0d: Xylose Isomerase from Bacillus Stearothermophilus
  3. 1a0e: Xylose Isomerase from Thermotoga Neapolitana
  4. 1bhw: Low Temperature Middle Resolution Structure of Xylose Isomerase from Masc Data
  5. 1bxb: Xylose Isomerase from Thermus Thermophilus
  6. 1bxc: Xylose Isomerase from Thermus Caldophilus
  7. 1clk: Crystal Structure of Streptomyces Diastaticus No.7 Strain M1033 Xylose Isomerase at 1.9 a Resolution with Pseudo- I222 Space Group
  8. 1did: Observations of Reaction Intermediates and The Mechanism of Aldose-ketose Interconversion by D-xylose Isomerase
  9. 1die: Observations of Reaction Intermediates and The Mechanism of Aldose-ketose Interconversion by D-xylose Isomerase
  10. 1dxi: Structure Determination of Glucose Isomerase from Streptomyces Murinus at 2.6 Angstroms Resolution
  11. 1gw9: Tri-iodide Derivative of Xylose Isomerase from Streptomyces Rubiginosus
  12. 9xim: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  13. 9xia: X-ray Analysis of D-xylose Isomerase at 1.9 Angstroms: Native Enzyme in Complex with Substrate and with a Mechanism-designed Inactivator
  14. 8xim: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  15. 8xia: X-ray Analysis of D-xylose Isomerase at 1.9 Angstroms: Native Enzyme in Complex with Substrate and with a Mechanism-designed Inactivator
  16. 7xim: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  17. 6xim: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  18. 6xia: Refinement of Glucose Isomerase from Streptomyces Albus at 1.65 Angstroms with Data from an Imaging Plate
  19. 5xin: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  20. 5xim: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  21. 5xia: Structures of D-xylose Isomerase from Arthrobacter Strain B3728 Containing The Inhibitors Xylitol and D-sorbitol at 2.5 Angstroms and 2.3 Angstroms Resolution, Respectively
  22. 4xis: A Metal-mediated Hydride Shift Mechanism for Xylose Isomerase Based on The 1.6 Angstroms Streptomyces Rubiginosus Structures with Xylitol and D-xylose
  23. 4xim: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  24. 4xia: Structures of D-xylose Isomerase from Arthrobacter Strain B3728 Containing The Inhibitors Xylitol and D-sorbitol at 2.5 Angstroms and 2.3 Angstroms Resolution, Respectively
  25. 3xis: A Metal-mediated Hydride Shift Mechanism for Xylose Isomerase Based on The 1.6 Angstroms Streptomyces Rubiginosus Structures with Xylitol and D-xylose
  26. 3xin: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  27. 3xim: Arginine Residues as Stabilizing Elements in Proteins
  28. 1mnz: Atomic Structure of Glucose Isomerase
  29. 1muw: The 0.86 Angstrom Structure of Xylose Isomerase
  30. 3ktc: Crystal Structure of Putative Sugar Isomerase (yp_050048.1) from Erwinia Carotovora Atroseptica Scri1043 at 1.54 a Resolution
  31. 1o1h: Structure of Glucose Isomerase Derivatized with Kr.
  32. 1oad: Glucose Isomerase from Streptomyces Rubiginosus in P21212 Crystal Form
  33. 3kco: Room Temperature Neutron Structure of D-xylose Isomerase in Complex with Two Ni2+ Cations and D12-d-glucose in The Linear Form (refined Jointly with X-ray Structure 3kbn)
  34. 3kcl: Room Temperature Neutron Structure of D-xylose Isomerase in Complex with Two Cd2+ Cations and D12-d-alpha-glucose in The Ring Form (refined Jointly with X-ray Structure 3kbm)
  35. 3kcj: Room Temperature Neutron Structure of Apo-d-xylose Isomerase (refined Jointly with X-ray Structure 3kbj)
  36. 3kbw: Room Temperature X-ray Mixed-metal Structure of D-xylose Isomerase in Complex with Ni(2+) and Mg(2+) Co-factors
  37. 3kbv: Room Temperature Structure of D-xylose Isomerase in Complex with 2ni(2+) Co-factors
  38. 3kbs: Room Temperature X-ray Structure of D-xylose Isomerase in Complex with 2cd(2+) Co-factors
  39. 3kbn: Room Temperature Structure of D-xylose Isomerase in Complex with 2ni(2+) Co-factors and D12-d-glucose in The Linear Form
  40. 3kbm: Room Temperature X-ray Structure of D-xylose Isomerase Complexed with 2cd(2+) Co-factors and D12-d-alpha-glucose in The Cyclic Form
  41. 3kbj: Room Temperature X-ray Structure of Apo-d-xylose Isomerase
  42. 1qt1: Crystal Structure of Xylose Isomerase from Streptomyces Diastaticus No.7 M1033 at 1.85 a Resolution
  43. 3gnx: Structure of Dehydrated D-xylose Isomerase from Streptomyces Rubiginosus
  44. 1s5m: Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies of a Metal-mediated Hydride Shift
  45. 1s5n: Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies of a Metal-mediated Hydride Shift
  46. 3cwh: D-xylose Isomerase in Complex with Linear Product, Per- Deuterated Xylulose
  47. 1xia: Comparison of Backbone Structures of Glucose Isomerase from Streptomyces and Arthrobacter
  48. 1xib: Modes of Binding Substrates and Their Analogues to The Enzyme D-xylose Isomerase
  49. 1xic: Modes of Binding Substrates and Their Analogues to The Enzyme D-xylose Isomerase
  50. 1xid: Modes of Binding Substrates and Their Analogues to The Enzyme D-xylose Isomerase
  51. 1xie: Modes of Binding Substrates and Their Analogues to The Enzyme D-xylose Isomerase
  52. 1xif: Modes of Binding Substrates and Their Analogues to The Enzyme D-xylose Isomerase
  53. 1xig: Modes of Binding Substrates and Their Analogues to The Enzyme D-xylose Isomerase
  54. 1xih: Modes of Binding Substrates and Their Analogues to The Enzyme D-xylose Isomerase
  55. 1xii: Modes of Binding Substrates and Their Analogues to The Enzyme D-xylose Isomerase
  56. 1xij: Modes of Binding Substrates and Their Analogues to The Enzyme D-xylose Isomerase
  57. 1xim: Arginine Residues as Stabilizing Elements in Proteins
  58. 1xin: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  59. 1xis: A Metal-mediated Hydride Shift Mechanism for Xylose Isomerase Based on The 1.6 Angstroms Streptomyces Rubiginosus Structures with Xylitol and D-xylose
  60. 1xla: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  61. 1xlb: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  62. 1xlc: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  63. 1xld: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  64. 1xle: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  65. 1xlf: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  66. 1xlg: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  67. 1xlh: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  68. 1xli: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  69. 1xlj: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  70. 1xlk: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  71. 1xll: Mechanism for Aldose-ketose Interconversion by D-xylose Isomerase Involving Ring Opening Followed by a 1,2-hydride Shift
  72. 1xlm: D254E, D256E Mutant of D-xylose Isomerase Complexed with Al3 and Xylitol
  73. 2xis: A Metal-mediated Hydride Shift Mechanism for Xylose Isomerase Based on The 1.6 Angstroms Streptomyces Rubiginosus Structures with Xylitol and D-xylose
  74. 2xin: Protein Engineering of Xylose (glucose) Isomerase from Actinoplanes Missouriensis. 1. Crystallography and Site- Directed Mutagenesis of Metal Binding Sites
  75. 2xim: Arginine Residues as Stabilizing Elements in Proteins
  76. 1xya: X-ray Crystallographic Structures of D-xylose Isomerase- Substrate Complexes Position The Substrate and Provide Evidence for Metal Movement during Catalysis
  77. 1xyb: X-ray Crystallographic Structures of D-xylose Isomerase- Substrate Complexes Position The Substrate and Provide Evidence for Metal Movement during Catalysis
  78. 1xyc: X-ray Crystallographic Structures of D-xylose Isomerase- Substrate Complexes Position The Substrate and Provide Evidence for Metal Movement during Catalysis
  79. 1xyl: The Role of The Divalent Metal Ion in Sugar Binding, Ring Opening, and Isomerization by D-xylose Isomerase: Replacement of a Catalytic Metal by an Amino-acid
  80. 1xym: The Role of The Divalent Metal Ion in Sugar Binding, Ring Opening, and Isomerization by D-xylose Isomerase: Replacement of a Catalytic Metal by an Amino-acid
  81. 2g4j: Anomalous Substructure of Glucose Isomerase
  82. 2glk: High-resolution Study of D-xylose Isomerase, 0.94a Resolution.
  83. 2gub: Crystal Structure of Metal Free D-xylose Isomerase.
  84. 2gve: Time-of-flight Neutron Diffraction Structure of D-xylose Isomerase
  85. 2gyi: Design, Synthesis, and Characterization of a Potent Xylose Isomerase Inhibitor, D-threonohydroxamic Acid, and High- Resolution X-ray Crystallographic Structure of The Enzyme- Inhibitor Complex
  86. 3n4a: Crystal Structure of D-xylose Isomerase in Complex with S-1,2- Propandiol
  87. 3qys: Room Temperature X-ray Structure of D-xylose Isomerase in Complex with 0.6ni2+ Cation Bound in M2 Metal Binding Site at Ph=5.8
  88. 3qza: Joint Neutron and X-ray Structure of Apo-d-xylose Isomerase at Ph=5.9
  89. 3u3h: X-ray Crystallographic Analysis of D-xylose Isomerase-catalyzed Isomerization of (r)-glyceraldehyde
  90. 4a8i: Protein Crystallization and Microgravity: Glucose Isomerase Crystals Grown during The Pcdf-protein Mission
  91. 4a8l: Protein Crystallization and Microgravity: Glucose Isomerase Crystals Grown during The Pcdf-protein Mission
  92. 4a8r: Protein Crystallization and Microgravity: Glucose Isomerase Crystals Grown during The Pcdf-protein Mission
  93. 4a8n: Protein Crystallization and Microgravity: Glucose Isomerase Crystals Grown during The Pcdf-protein Mission
  94. 4e3v: Crystal Structure of Xylose Isomerase from Streptomyces Rubiginosus Cryoprotected in Proline
  95. 4duo: Room-temperature X-ray Structure of D-xylose Isomerase in Complex with 2mg2+ Ions and Xylitol at Ph 7.7
  96. 4dvo: Room-temperature Joint X-ray/neutron Structure of D-xylose Isomerase in Complex with 2ni2+ and Per-deuterated D-sorbitol at Ph 5.9
  97. 4hhl: High Resolution Crystal Structure of Glucose Isomerase from Streptomyces Sp. Sk
  98. 4hhm: Crystal Structure of a Mutant, G219A, of Glucose Isomerase from Streptomyces Sp. Sk
  99. 4j4k: Crystal Structure of Glucose Isomerase
  100. 4lnc: Neutron Structure of The Cyclic Glucose Bound Xylose Isomerase E186Q Mutant
  101. 4qdp: Joint X-ray and Neutron Structure of Streptomyces Rubiginosus D-xylose Isomerase in Complex with Two Cd2+ Ions and Cyclic Beta-l-arabinose
  102. 4qdw: Joint X-ray and Neutron Structure of Streptomyces Rubiginosus D-xylose Isomerase in Complex with Two Ni2+ Ions and Linear L-arabinose
  103. 4qe1: Room Temperature X-ray Structure of D-xylose Isomerase in Complex with Two Cd2+ Ions and L-ribulose
  104. 4qe4: Room Temperature X-ray Structure of D-xylose Isomerase in Complex with Two Ni2+ Ions and L-ribulose
  105. 4qe5: Room Temperature X-ray Structure of D-xylose Isomerase in Complex with Two Mg2+ Ions and L-ribulose
  106. 4qee: Room Temperature X-ray Structure of D-xylose Isomerase in Complex with Two Ni2+ Ions and L-ribose
  107. 4qeh: Room Temperature X-ray Structure of D-xylose Isomerase in Complex with Two Mg2+ Ions and L-ribose
  108. 4w4q: Glucose Isomerase Structure Determined by Serial Femtosecond Crystallography at Sacla
  109. 4us6: New Crystal Form of Glucose Isomerase Grown in Short Peptide Supramolecular Hydrogels
  110. 4xkm: Crystal Structure of Xylose Isomerase from an Human Intestinal Tract Microbe Bacteroides Thetaiotaomicron
  111. 4zb0: A Dehydrated Form of Glucose Isomerase Collected at Room Temperature.
  112. 4zb2: A Native Form of Glucose Isomerase Collected at Room Temperature.
  113. 4zb5: A Form of Glucose Isomerase Collected at 100k.
  114. 4zbc: A Dehydrated Form of Glucose Isomerase Collected at 100k.
  115. 5avh: The 0.90 Angstrom Structure (i222) of Glucose Isomerase Crystallized in High-strength Agarose Hydrogel
  116. 5avn: The 1.03 Angstrom Structure (p212121) of Glucose Isomerase Crystallized in High-strength Agarose Hydrogel
  117. 5i7g: Metal Free Glucose Isomerase Collected at Room Temperature Using The HC1B Humidity Controller
  118. 5nh4: Crystal Structure of Xylose Isomerase from Piromyces E2 in Complex with One Mg2+ Ions and Glycerol
  119. 5nh5: Crystal Structure of Native Xylose Isomerase from Piromyces E2
  120. 5nh6: Crystal Structure of Xylose Isomerase from Piromyces E2 Complexed with One Mg2+ Ion and Xylitol
  121. 5nh7: Crystal Structure of Xylose Isomerase from Piromyces E2 in Complex with Two Mg2+ Ions and Xylose
  122. 5nh8: Crystal Structure of Xylose Isomerase from Piromyces E2 in Complex with Two Ca2+ Ions and Xylose
  123. 5nh9: Crystal Structure of Xylose Isomerase from Piromyces E2 in Complex with Two Mn2+ Ions and Xylose
  124. 5nha: Crystal Structure of Xylose Isomerase from Piromyces Sp. E2 in Complex with Two Mn2+ Ions and Sorbitol
  125. 5nhb: Crystal Structure of Xylose Isomerase from Piromyces E2 in Complex with Two Fe2+ Ions
  126. 5nhc: Crystal Structure of Xylose Isomerase from Piromyces E2 in Complex with Two Co2+ Ions and Xylulose
  127. 5nhd: Crystal Structure of Xylose Isomerase from Piromyces E2 in Complex with 2 Ni2+ Ions and Xylose
  128. 5nhe: Crystal Structure of Xylose Isomerase from Piromyces E2 in Complex with Two Cd2+ Ions and Xylose
  129. 5nhm: Crystal Structure of Apo Xylose Isomerase from Piromyces E2
  130. 5vr0: Crystal Structure of Glucose Isomerase from Streptomyces Rubiginosus
  131. 5y4i: Crystal Structure of Glucose Isomerase in Complex with Glycerol in One Metal Binding Mode
  132. 5y4j: Crystal Structure of Glucose Isomerase in Complex with Xylitol Inhibitor in One Metal Binding Mode
  133. 5yn3: Crystal Strcuture of Xylose Isomerase from Piromyces Sp. E2
  134. 5zyc: Crystal Structure of Glucose Isomerase Soaked with Mn2+
  135. 5zyd: Crystal Structure of Glucose Isomerase Soaked with Glucose
  136. 5zye: Crystal Structure of Glucose Isomerase Soaked with Mn2+ and Glucose
  137. 6irk: Crystal Structure of Glucose Isomerase by Fixed-target Serial Femtosecond Crystallography
  138. 6kd2: Room Temperature Structure of Glucose Isomerase Delivered in Gelatin by Serial Millisecond Crystallography
  139. 6n98: Xylose Isomerase 1f1 Variant from Streptomyces Sp. F-1
  140. 6n99: Xylose Isomerase 2f1 Variant from Streptomyces Sp. F-1
  141. 6qnc: Liquid Application Method for Time-resolved Analyses (lama) by Serial Synchrotron Crystallography, Xylose Isomerase 0.1 S Timepoint
  142. 6qnd: Liquid Application Method for Time-resolved Analyses (lama) by Serial Synchrotron Crystallography, Xylose Isomerase 60 S Timepoint
  143. 6qnh: Liquid Application Method for Time-resolved Analyses (lama) by Serial Synchrotron Crystallography, Xylose Isomerase 0ms Timepoint
  144. 6qni: Liquid Application Method for Time-resolved Analyses (lama) by Serial Synchrotron Crystallography, Xylose Isomerase 1.0 S Timepoint
  145. 6qnj: Liquid Application Method for Time-resolved Analyses (lama) by Serial Synchrotron Crystallography, Xylose Isomerase 4.5 S Timepoint
  146. 6qrr: X-ray Radiation Dose Series on Xylose Isomerase - 0.13 Mgy
  147. 6qrs: X-ray Radiation Dose Series on Xylose Isomerase - 0.13 Mgy
  148. 6qrt: X-ray Radiation Dose Series on Xylose Isomerase - 1.38 Mgy
  149. 6qru: X-ray Radiation Dose Series on Xylose Isomerase - 2.01 Mgy
  150. 6qrv: X-ray Radiation Dose Series on Xylose Isomerase - 2.63 Mgy
  151. 6qrw: X-ray Radiation Dose Series on Xylose Isomerase - 3.25 Mgy
  152. 6qrx: X-ray Radiation Dose Series on Xylose Isomerase - 3.88 Mgy
  153. 6qry: X-ray Radiation Dose Series on Xylose Isomerase - Merged Data
  154. 6quf: Protein Crystallization by Ionic Liquid Hydrogel Support: Reference Crystal of Glucose Isomerase Grown on Standard Silanized Glass
  155. 6quk: Protein Crystallization by Ionic Liquid Hydrogel Support: Glucose Isomerase Grown by Using Ionic Liquid Hydrogel
  156. 6rnd: Liquid Application Method for Time-resolved Analyses (lama) by Serial Synchrotron Crystallography, Xylose Isomerase 15 Ms Timepoint
  157. 6rnf: Liquid Application Method for Time-resolved Analyses (lama) by Serial Synchrotron Crystallography, Xylose Isomerase 30 Ms Timepoint
  158. 6oqz: Crystal Structure of Glucose Isomerase from Non-merohedrally Twinned Crystals
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