EC 6.3.2.19 - ubiquitin:protein- lysine N- ligase (AMP- forming)

3D structures of EC 6.3.2.19 in Protein Data Bank

updated: 6 January 2022, 2:15

1. 1a3s: Human Ubc9
2. 1ayz: Crystal Structure of The Saccharomyces Cerevisiae Ubiquitin- Conjugating Enzyme Rad6 (ubc2) at 2.6a Resolution
3. 1c4z: Structure of E6AP: Insights into Ubiquitination Pathway
4. 1fbv: Structure of a Cbl-ubch7 Complex: Ring Domain Function in Ubiquitin-protein Ligases
5. 1fxt: Structure of a Conjugating Enzyme-ubiquitin Thiolester Complex
6. 1fzy: Crystal Structure of Saccharomyces Cerevisiae Ubiquitin Conjugating Enzyme 1
7. 1i7k: Crystal Structure of Human Mitotic-specific Ubiquitin- Conjugating Enzyme, Ubch10
8. 1iyf: Solution Structure of Ubiquitin-like Domain of Human Parkin
9. 1j7d: Crystal Structure of Hmms2-hubc13
10. 1jas: HSUBC2B
11. 1jat: Mms2/ubc13 Ubiquitin Conjugating Enzyme Complex
12. 1jbb: Ubiquitin Conjugating Enzyme, Ubc13
13. 1kps: Structural Basis for E2-mediated Sumo Conjugation Revealed by a Complex between Ubiquitin Conjugating Enzyme Ubc9 and Rangap1
14. 3ny3: Structure of The Ubr-box of Ubr2 in Complex with N-degron
15. 3ny1: Structure of The Ubr-box of The Ubr1 Ubiquitin Ligase
16. 3l3p: Crystal Structure of The C-terminal Domain of Shigella Type III Effector Ipah9.8, with a Novel Domain Swap
17. 3l1z: Crystal Structure of The U-box Domain of Human E4B Ubiquitin Ligase in Complex with UBCH5C E2 Ubiquitin Conjugating Enzyme
18. 3l1y: Crystal Structure of Human Ubc4 E2 Conjugating Enzyme
19. 3k9p: The Crystal Structure of E2-25k and Ubiquitin Complex
20. 3k9o: The Crystal Structure of E2-25k and Ubb+1 Complex
21. 3k1l: Crystal Structure of Fancl
22. 3jw0: E2~ubiquitin-hect
23. 3jvz: E2~ubiquitin-hect
24. 1pzv: Crystal Structures of Two Ubc (e2) Enzymes of The Ubiquitin- Conjugating System in Caenorhabditis Elegans
25. 1q34: Crystal Structures of Two Ubc (e2) Enzymes of The Ubiquitin- Conjugating System in Caenorhabditis Elegans
26. 1qcq: Ubiquitin Conjugating Enzyme
27. 3hcu: Crystal Structure of Traf6 in Complex with Ubc13 in The C2 Space Group
28. 3hct: Crystal Structure of Traf6 in Complex with Ubc13 in The P1 Space Group
29. 3h8k: Crystal Structure of UBE2G2 Complxed with The G2BR Domain of Gp78 at 1.8-a Resolution
30. 3g06: The Salmonella Virulence Effector Ssph2 Functions as a Novel E3 Ligase
31. 3fsh: Crystal Structure of The Ubiquitin Conjugating Enzyme UBE2G2 Bound to The G2BR Domain of Ubiquitin Ligase Gp78
32. 3ehv: X-ray Structure of Human Ubiquitin Zn(ii) Adduct
33. 3eb6: Structure of The Ciap2 Ring Domain Bound to UBCH5B
34. 3e46: Crystal Structure of Ubiquitin-conjugating Enzyme E2-25kda (huntington Interacting Protein 2) M172A Mutant
35. 1tte: The Structure of a Class II Ubiquitin-conjugating Enzyme, Ubc1.
36. 1u9a: Human Ubiquitin-conjugating Enzyme Ubc9
37. 1u9b: Murine/human Ubiquitin-conjugating Enzyme Ubc9
38. 1umh: Structural Basis of Sugar-recognizing Ubiquitin Ligase
39. 1umi: Structural Basis of Sugar-recognizing Ubiquitin Ligase
40. 1ur6: Nmr Based Structural Model of The UBCH5B-CNOT4 Complex
41. 3cmm: Crystal Structure of The Uba1-ubiquitin Complex
42. 3ckd: Crystal Structure of The C-terminal Domain of The Shigella Type III Effector Ipah
43. 3ceg: Crystal Structure of The Ubc Domain of Baculoviral Iap Repeat-containing Protein 6
44. 3bzh: Crystal Structure of Human Ubiquitin-conjugating Enzyme E2 E1
45. 1w4u: Nmr Solution Structure of The Ubiquitin Conjugating Enzyme UBCH5B
46. 1wd2: Solution Structure of The C-terminal Ring from a Ring-ibr- Ring (triad) Motif
47. 3a33: UBCH5B~UBIQUITIN Conjugate
48. 1wzv: Crystal Structure of Ubch8
49. 1wzw: Crystal Structure of Ubch8
50. 1x23: Crystal Structure of UBCH5C
51. 2z6p: Crystal Structure of The Ufc1, Ufm1 Conjugating Enzyme 1
52. 2z6o: Crystal Structure of The Ufc1, Ufm1 Conjugating Enzyme 1
53. 2z5d: Human Ubiquitin-conjugating Enzyme E2 H
54. 1xr9: Crystal Structures of Hla-b*1501 in Complex with Peptides from Human Ubch6 and Epstein-barr Virus Ebna-3
55. 1y6l: Human Ubiquitin Conjugating Enzyme E2E2
56. 1y8x: Structural Basis for Recruitment of Ubc12 by an E2-binding Domain in Nedd8's E1
57. 1yla: Ubiquitin-conjugating Enzyme E2-25 Kda (huntington Interacting Protein 2)
58. 1yrv: Novel Ubiquitin-conjugating Enzyme
59. 1z2u: The 1.1a Crystallographic Structure of Ubiquitin- Conjugating Enzyme (ubc-2) from Caenorhabditis Elegans: Functional and Evolutionary Significance
60. 1z3d: Protein Crystal Growth Improvement Leading to The 2.5a Crystallographic Structure of Ubiquitin-conjugating Enzyme (ubc-1) from Caenorhabditis Elegans
61. 1z5s: Crystal Structure of a Complex between Ubc9, Sumo-1, Rangap1 and Nup358/ranbp2
62. 1z6u: Np95-like Ring Finger Protein Isoform B [homo Sapiens]
63. 1zdn: Ubiquitin-conjugating Enzyme E2S
64. 1zuo: Structure of Human Ubiquitin-conjugating Enzyme (ubci) Involved in Embryo Attachment and Implantation
65. 2vrr: Structure of Sumo Modified Ubc9
66. 2a4d: Structure of The Human Ubiquitin-conjugating Enzyme E2 Variant 1 (uev-1)
67. 2a7l: Structure of The Human Hypothetical Ubiquitin-conjugating Enzyme, Loc55284
68. 2aak: Ubiquitin Conjugating Enzyme from Arabidopsis Thaliana
69. 2uyz: Non-covalent Complex between Ubc9 and Sumo1
70. 2awf: Structure of Human Ubiquitin-conjugating Enzyme E2 G1
71. 2ucz: Ubiquitin Conjugating Enzyme (ubc7) from Saccharomyces Cerevisiae
72. 2ayv: Crystal Structure of a Putative Ubiquitin-conjugating Enzyme E2 from Toxoplasma Gondii
73. 2bep: Crystal Structure of Ubiquitin Conjugating Enzyme E2-25k
74. 2bf8: Crystal Structure of Sumo Modified Ubiquitin Conjugating Enzyme E2-25k
75. 2rj2: Crystal Structure of The Sugar Recognizing Scf Ubiquitin Ligase at 1.7 Resolution
76. 2c4p: Crystal Structure of Human Ubiquitin-conjugating Enzyme UBCH5A
77. 2qgx: Ubiquitin-conjugating Enzyme E2Q
78. 2clw: Crystal Structure of Human Ubiquitin-conjugating Enzyme UBCH5B
79. 2cyx: Structure of Human Ubiquitin-conjugating Enzyme E2 G2 (UBE2G2/UBC7)
80. 2oxq: Structure of The Ubch5 :chip U-box Complex
81. 2onu: Plasmodium Falciparum Ubiquitin Conjugating Enzyme Pf10_0330, Putative Homologue of Human UBE2H
82. 2ogb: Crystal Structure of The C-terminal Domain of Mouse Nrdp1
83. 2ob4: Human Ubiquitin-conjugating Enzyme Cdc34
84. 2o25: Ubiquitin-conjugating Enzyme E2-25 Kda Complexed with Sumo- 1-conjugating Enzyme Ubc9
85. 2e2c: E2-c, an Ubiquitin Conjugating Enzyme Required for The Destruction of Mitotic Cyclins
86. 2eke: Structure of a Sumo-binding-motif Mimic Bound to SMT3P- UBC9P: Conservation of a Noncovalent Ubiquitin-like Protein-e2 Complex as a Platform for Selective Interactions within a Sumo Pathway
87. 2esk: Human Ubiquitin-conjugating Enzyme (e2) UBCH5B, Wild-type
88. 2eso: Human Ubiquitin-conjugating Enzyme (e2) UBCH5B Mutant ILE37ALA
89. 2esp: Human Ubiquitin-conjugating Enzyme (e2) UBCH5B Mutant ILE88ALA
90. 2esq: Human Ubiquitin-conjugating Enzyme (e2) UBCH5B Mutant SER94GLY
91. 2f4w: Human Ubiquitin-conjugating Enzyme E2 J2
92. 2fo3: Plasmodium Vivax Ubiquitin Conjugating Enzyme E2
93. 2fuh: Solution Structure of The UBCH5C/UB Non-covalent Complex
94. 2gjd: Distinct Functional Domains of Ubc9 Dictate Cell Survival and Resistance to Genotoxic Stress
95. 2gmi: Mms2/ubc13~ubiquitin
96. 2grn: Crystal Structure of Human Rangap1-ubc9
97. 2gro: Crystal Structure of Human RANGAP1-UBC9-N85Q
98. 2grp: Crystal Structure of Human RANGAP1-UBC9-Y87A
99. 2grq: Crystal Structure of Human RANGAP1-UBC9-D127A
100. 2grr: Crystal Structure of Human RANGAP1-UBC9-D127S
101. 2h2y: Crystal Structure of Ubiquitin Conjugating Enzyme E2 from Plasmodium Falciparum
102. 2kjh: Nmr Based Structural Model of The Ubch8-ubiquitin Complex
103. 2kly: Solution Structure of Human Ubiquitin Conjugating Enzyme UBE2G2
104. 3oj4: Crystal Structure of The A20 Znf4, Ubiquitin and UBCH5A Complex
105. 2xwu: Crystal Structure of Importin 13 - Ubc9 Complex
106. 2ybf: Complex of Rad18 (rad6 Binding Domain) with RAD6B
107. 2y4w: Solution Structure of Human Ubiquitin Conjugating Enzyme RAD6B
108. 3ptf: X-ray Structure of The Non-covalent Complex between UBCH5A and Ubiquitin
109. 2yho: The IDOL-UBE2D Complex Mediates Sterol-dependent Degradation of The Ldl Receptor
110. 3rz3: Human Cdc34 E2 in Complex with Cc0651 Inhibitor
111. 3zqs: E3 Ligase
112. 3rpg: BMI1/RING1B-UBCH5C Complex Structure
113. 3tgd: Crystal Structure of The Human Ubiquitin-conjugating Enzyme (e2) UBCH5B
114. 2y9m: PEX4P-PEX22P Structure
115. 3sqv: Crystal Structure of E. Coli O157:h7 E3 Ubiquitin Ligase, Nlel, with a Human E2, Ubch7
116. 3sy2: Crystal Structure of The Salmonella E3 Ubiquitin Ligase Sopa in Complex with The Human E2 Ubch7
117. 4a4b: Structure of Modified PHOSPHOTYR371-C-CBL-UBCH5B-ZAP-70 Complex
118. 4a4c: Structure of PHOSPHOTYR371-C-CBL-UBCH5B-ZAP-70 Complex
119. 4ddg: Crystal Structure of Human OTUB1/UBCH5B~UB/UB
120. 4ddi: Crystal Structure of Human OTUB1/UBCH5B~UB/UB
121. 4dhi: Structure of C. Elegans Otub1 Bound to Human Ubc13
122. 4dhj: The Structure of a Ceotub1 Ubiquitin Aldehyde Ubc13~ub Complex
123. 4dhz: The Structure of H/ceotub1-ubiquitin Aldehyde-ubc13~ub
124. 2y9p: PEX4P-PEX22P Mutant II Structure
125. 3ugb: UBCH5C~UBIQUITIN Conjugate
126. 3von: Crystalstructure of The Ubiquitin Protease
127. 4ap4: Rnf4 - UBCH5A - Ubiquitin Heterotrimeric Complex
128. 4auq: Structure of BIRC7-UBCH5B-UB Complex.
129. 4fh1: S. Cerevisiae UBC13-N79A
130. 4ii2: Crystal Structure of Ubiquitin Activating Enzyme 1 (uba1) in Complex with The Ub E2 Ubc4, Ubiquitin, and Atp/mg
131. 4ii3: Crystal Structure of S. Pombe Ubiquitin Activating Enzyme 1 (uba1) in Complex with Ubiquitin and Atp/mg
132. 3w31: Structual Basis for The Recognition of Ubc13 by The Shigella Flexneri Effector Ospi
133. 4ip3: Complex Structure of Ospi and Ubc13
134. 4jjq: Crystal Structure of Usp7-ntd with an E2 Enzyme
135. 4k7s: Crystal Structure of Zn2-hub (human Ubiquitin) Adduct from a Solution 35 Mm Zinc Acetate/1.3 Mm Hub
136. 4k7u: Crystal Structure of Zn2.3-hub (human Ubiquitin) Adduct from a Solution 70 Mm Zinc Acetate/1.3 Mm Hub
137. 4k7w: Crystal Structure of Zn3-hub(human Ubiquitin) Adduct from a Solution 100 Mm Zinc Acetate/1.3 Mm Hub
138. 4jqu: Crystal Structure of UBC7P in Complex with The U7BR of CUE1P
139. 3zni: Structure of Phosphotyr363-cbl-b - UBCH5B-UB - Zap-70 Peptide Complex
140. 4bwf: PEX4P-PEX22P Disulphide Bond Mutant
141. 2lxp: Nmr Structure of Two Domains in Ubiquitin Ligase Gp78, Ring and G2BR, Bound to Its Conjugating Enzyme UBE2G
142. 3we5: Crystal Structure of Ubiquitin Conjugating Enzyme E2 Ubca1 from Agrocybe Aegerita
143. 4b8e: Pry-spry Domain of Trim25
144. 4bvu: Structure of Shigella Effector Ospg in Complex with Host UBCH5C-UBIQUITIN Conjugate
145. 4lad: Crystal Structure of The UBE2G2:RING-G2BR Complex
146. 4ldt: The Structure of H/ceotub1-ubiquitin ALDEHYDE-UBCH5B~UB
147. 4mdk: Cdc34-ubiquitin-cc0651 Complex
148. 4orh: Crystal Structure of Rnf8 Bound to The Ubc13/mms2 Heterodimer
149. 4q5e: Shigella Effector Kinase Ospg Bound to E2-ub Ubch7-ub Conjugate
150. 4q5h: Shigella Effector Kinase Ospg Bound to Amppnp and E2-ub Ubch7-ub Conjugate
151. 4qpl: Crystal Structure of RNF146(RING-WWE)/UBCH5A/ISO-ADPR Complex
152. 4r8p: Crystal Structure of The RING1B/BMI1/UBCH5C Prc1 Ubiquitylation Module Bound to The Nucleosome Core Particle
153. 2mt6: Solution Structure of The Human Ubiquitin Conjugating Enzyme UBE2W
154. 4cfg: Structure of The Trim25 Coiled-coil
155. 4nr3: Crystal Structure of a Human Mms2/ubc13 L121G Mutant
156. 4nrg: Crystal Structure of a Human Mms2/ubc13 D118G Mutant
157. 4nri: Crystal Structure of a Human Mms2/ubc13 A122G Mutant
158. 5miy: Crystal Structure of The E3 Ubiquitin Ligase Ravn from Legionella Pneumophila
159. 5fqd: Structural Basis of Lenalidomide Induced CK1A Degradation by The CRL4CRBN Ubiquitin Ligase
160. 5din: Structural Basis for The Indispensable Role of a Unique Zinc Finger Motif in Lnx2 Ubiquitination
161. 5dfl: Crystal Structure of UBE2K~UBIQUITIN Conjugate
162. 5d1m: Crystal Structure of UBCH5B in Complex with The RING-U5BR Fragment of Ao7 (P199A)
163. 5d1l: Crystal Structure of UBCH5B in Complex with The RING-U5BR Fragment of Ao7 (Y165A)
164. 5d1k: Crystal Structure of UBCH5B in Complex with The RING-U5BR Fragment of Ao7
165. 5d0m: Structure of UBE2D2:RNF165:UB Complex
166. 5d0k: Structure of UBE2D2:RNF165:UB Complex
167. 5bnb: Crystal Structure of a UBE2S-UBIQUITIN Conjugate
168. 5aiu: A Complex of Rnf4-ring Domain, Ubc13-ub (isopeptide Crosslink)
169. 5ait: A Complex of of Rnf4-ring Domain, Ubev2, Ubc13-ub (isopeptide Crosslink)
170. 5aht: Third Ww Domain from The E3 Ubiquitin-protein Ligase Nedd4
171. 5afg: Structure of The Stapled Peptide Bound to Mdm2
172. 5a4p: Structure of UBE2Z Provides Functional Insight into Specificity in The Fat10 Conjugation Machinery
173. 4wz3: Crystal Structure of The Complex between Lubx/legu2/lpp2887 U-box 1 and Homo Sapiens UBE2D2
174. 4v3k: RNF38-UBCH5B-UB Complex
175. 4v3l: RNF38-UB-UBCH5B-UB Complex
176. 4yii: Structure of an Apc2-ubch10 Complex Reveals Distinctive Cullin-ring Ligase Mechanism for Anaphase-promoting Complex/cyclosome
177. 4onl: Crystal Structure of Human MMS2/UBC13_D81N, R85S, A122V, N123P
178. 4onm: Crystal Structure of Human Mms2/ubc13 - Nsc697923
179. 4onn: Crystal Structure of Human Mms2/ubc13 - Bay 11-7082
180. 5aie: Not4 Ring Domain in Complex with Ubc4
181. 4r62: Structure of Rad6~ub
182. 4s3o: PCGF5-RING1B-UBCH5C Complex
183. 4tkp: Complex of Ubc13 with The Ring Domain of The TRIM5ALPHA Retroviral Restriction Factor
184. 4whv: E3 Ubiquitin-protein Ligase Rnf8 in Complex with Ubiquitin-conjugating Enzyme E2 N and Polyubiquitin-b
185. 4x57: Structure of an Arabidopsis E2 / Membrane-anchored Ubiquitin-fold Protein Complex