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enzyme (lysozyme)

 
Enzymes
  Enzyme classes:
  EC 1: Oxidoreductases
  EC 2: Transferases
  EC 3: Hydrolases
  EC 4: Lyases
  EC 5: Isomerases
  EC 6: Ligases
    EC 6.1
    EC 6.2
    EC 6.3
    EC 6.4
    EC 6.5
      EC 6.5.1
        EC 6.5.1.1
        EC 6.5.1.2
        EC 6.5.1.3
        EC 6.5.1.4
    EC 6.6
  General information:
  Catalytic mechanism
  Enzyme kinetics
  Inhibitors
  Enzymes in industry

EC 6.5.1.1 - poly(deoxyribonucleotide) :poly(deoxyribonucleotide) ligase (AMP- forming)



3D structures of EC 6.5.1.1 in Protein Data Bank

updated: 29 October 2020, 11:13

In total: 42 PDB structures of EC 6.5.1.1:
  1. 1a0i: Atp-dependent Dna Ligase from Bacteriophage T7 Complex with Atp
  2. 1ik9: Crystal Structure of a Xrcc4-dna Ligase IV Complex
  3. 1imo: Nmr Structure of Human Dna Ligase Iiialpha Brct Domain
  4. 1in1: Nmr Structure of Human Dna Ligase Iiialpha Brct Domain
  5. 3l2p: Human Dna Ligase III Recognizes Dna Ends by Dynamic Switching between Two Dna Bound States
  6. 3ii6: Structure of Human Xrcc4 in Complex with The Tandem Brct Domains of Dna Ligaseiv.
  7. 3gde: The Closed Conformation of Atp-dependent Dna Ligase from Archaeoglobus Fulgidus
  8. 1uw0: Solution Structure of The Zinc-finger Domain from Dna Ligase Iiia
  9. 1x9n: Crystal Structure of Human Dna Ligase I Bound to 5'- Adenylated, Nicked Dna
  10. 1z56: Co-crystal Structure of LIF1P-LIG4P
  11. 2cfm: Atp-dependent Dna Ligase from Pyrococcus Furiosus
  12. 2od8: Structure of a Peptide Derived from Cdc9 Bound to Pcna
  13. 2e2w: Solution Structure of The First Brct Domain of Human Dna Ligase IV
  14. 2hiv: Atp-dependent Dna Ligase from S. Solfataricus
  15. 2hix: Atp Dependent Dna Ligase from S. Solfataricus Bound to Atp
  16. 3pc7: X-ray Crystal Structure of The Dna Ligase Iii-alpha Brct Domain.
  17. 3pc8: X-ray Crystal Structure of The Heterodimeric Complex of Xrcc1 and Dna Ligase Iii-alpha Brct Domains.
  18. 3qvg: Xrcc1 Bound to Dna Ligase
  19. 3rr5: Dna Ligase from The Archaeon Thermococcus Sp. 1519
  20. 4eq5: Dna Ligase from The Archaeon Thermococcus Sibiricus
  21. 3vnn: Crystal Structure of a Sub-domain of The Nucleotidyltransferase (adenylation) Domain of Human Dna Ligase IV
  22. 4hto: Crystal Structure of The Dbd Domain of Human Dna Ligase IV Apo Form
  23. 4htp: Crystal Structure of The Dbd Domain of Human Dna Ligase IV Bound to Artemis Peptide
  24. 3w1b: Crystal Structure of Human Dna Ligase Iv-artemis Complex (mercury Derivative)
  25. 3w1g: Crystal Structure of Human Dna Ligase Iv-artemis Complex (native)
  26. 3w5o: Crystal Structure of Human Dna Ligase IV
  27. 4rj9: Structure of a Plant Specific C2 Domain Protein, Osgap1 from Rice
  28. 5fpo: Structure of Bacterial Dna Ligase with Small-molecule Ligand 1h-indazol-7-amine (at4213) in an Alternate Binding Site.
  29. 5fpr: Structure of Bacterial Dna Ligase with Small-molecule Ligand Pyrimidin-2-amine (at371) in an Alternate Binding Site.
  30. 5wfy: Crystal Structure of Dna-binding Domain of The Bacteriophage T4 Ligase
  31. 6bkf: Lysyl-adenylate Form of Human Ligiv Catalytic Domain with Bound Dna Substrate in Open Conformation
  32. 6bkg: Human Ligiv Catalytic Domain with Bound Dna-adenylate Intermediate in Closed Conformation
  33. 6dt1: Crystal Structure of The Ligase from Bacteriophage T4 Complexed with Dna Intermediate
  34. 6nhx: Mycobacterial Dna Ligase D Complexed with Atp and Mes
  35. 6nhz: Mycobacterial Dna Ligase D Complexed with Atp and Mg
  36. 6p09: Human Dna Ligase 1 Bound to an Adenylated, Dideoxy Terminated Dna Nick with 200 Mm Mg2+
  37. 6p0a: Human Dna Ligase 1 Bound to an Adenylated, Dideoxy Terminated Dna Nick with 2 Mm Mg2+
  38. 6p0b: Human Dna Ligase 1 (E346A/E592A) Bound to an Adenylated, Dideoxy Terminated Dna Nick with 200 Mm Mg2+
  39. 6p0c: Human Dna Ligase 1 Bound to an Adenylated, Hydroxyl Terminated Dna Nick in Edta
  40. 6p0d: Human Dna Ligase 1 (E346A/E592A) Bound to an Adenylated, Hydroxyl Terminated Dna Nick
  41. 6p0e: Human Dna Ligase 1 (E346A,E592A) Bound to Adenylated Dna Containing an 8-oxo Guanine:adenine Base-pair
  42. 6q1v: Human Dna Ligase 1 (E592R) Bound to an Adenylated, Hydroxyl Terminated Dna Nick
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