EC 3.5.1.88 - formyl- L- methionyl peptide amidohydrolase (peptide deformylase)

3D structures of EC 3.5.1.88 - peptide deformylase in Protein Data Bank

updated: 6 January 2022, 2:15

1. 1ix1: Crystal Structure of P.aeruginosa Peptide Deformylase Complexed with Antibiotic Actinonin
2. 6jew: K3U Bound Crystal Peptide Deformylase from Acinetobacter Baumanii
3. 6jex: K4U Bound Crystal Peptide Deformylase from Acinetobacter Baumanii
4. 6jfo: Formyl-met-ala-ser Bound Crystal Structure of Class II Peptide Deformylase from Methicillin Resistant Staphylococcus Aureus
5. 3oca: Crystal Structure of Peptide Deformylase from Ehrlichia Chaffeensis
6. 1lm4: Structure of Peptide Deformylase from Staphylococcus Aureus at 1.45 a
7. 1lm6: Crystal Structure of Peptide Deformylase from Streptococcus Pneumoniae
8. 1lme: Crystal Structure of Peptide Deformylase from Thermotoga Maritima
9. 1lqw: Crystal Structure of S.aureus Peptide Deformylase
10. 1lqy: Crystal Structure of Bacillus Stearothermophilus Peptide Deformylase Complexed with Antibiotic Actinonin
11. 1lru: Crystal Structure of E.coli Peptide Deformylase Complexed with Antibiotic Actinonin
12. 1lry: Crystal Structure of P. Aeruginosa Peptide Deformylase Complexed with Antibiotic Actinonin
13. 1n5n: Crystal Structure of Peptide Deformylase from Pseudomonas Aeruginosa
14. 6jes: Apo Crystal Structure of Class I Type B Peptide Deformylase from Acinetobacter Baumannii
15. 3k6l: The Structure of E.coli Peptide Deformylase (pdf) in Complex with Peptidomimetic Ligand Bb2827
16. 1q1y: Crystal Structures of Peptide Deformylase from Staphylococcus Aureus Complexed with Actinonin
17. 3g6n: Crystal Structure of an Efpdf Complex with Met-ala-ser
18. 3g5p: Structure and Activity of Human Mitochondrial Peptide Deformylase, a Novel Cancer Target
19. 3g5k: Structure and Activity of Human Mitochondrial Peptide Deformylase, a Novel Cancer Target
20. 1s17: Identification of Novel Potent Bicyclic Peptide Deformylase Inhibitors
21. 1sv2: Crystal Structure of Peptide Deformylase from Leptospira Interrogans (lipdf) at Ph7.5
22. 6jff: K3U Bound Crystal Structure of Class I Type B Peptide Deformylase from Pseudomonas Aeruginosa
23. 6jfg: K1U Bound Crystal Structure of Class II Peptide Deformylase from Methicillin Resistant Staphylococcus Aureus
24. 1szz: Crystal Structure of Peptide Deformylase from Leptospira Interrogans Complexed with Inhibitor Actinonin
25. 3e3u: Crystal Structure of Mycobacterium Tuberculosis Peptide Deformylase in Complex with Inhibitor
26. 6jet: Actinonin Bound Crystal Structure of Class I Type a Peptide Deformylase from Acinetobacter Baumannii
27. 6jfq: K2U Bound Crystal Structure of Class II Peptide Deformylase from Methicillin Resistant Staphylococcus Aureus
28. 3cpm: Plant Peptide Deformylase PDF1B Crystal Structure
29. 3cmd: Crystal Structure of Peptide Deformylase from Vre-e.faecium
30. 1v3y: The Crystal Structure of Peptide Deformylase from Thermus Thermophilus Hb8
31. 1vev: Crystal Structure of Peptide Deformylase from Leptospira Interrogans (lipdf) at Ph6.5
32. 1vey: Crystal Structure of Peptide Deformylase from Leptospira Interrogans (lipdf) at Ph7.0
33. 1vez: Crystal Structure of Peptide Deformylase from Leptospira Interrogans(lipdf) at Ph8.0
34. 1ws0: Structure Analysis of Peptide Deformylase from Bacillus Cereus
35. 1ws1: Structure Analysis of Peptide Deformylase from Bacillus Cereus
36. 1xem: High Resolution Crystal Structure of Escherichia Coli Zinc- Peptide Deformylase Bound to Formate
37. 1xen: High Resolution Crystal Structure of Escherichia Coli Iron- Peptide Deformylase Bound to Formate
38. 1xeo: High Resolution Crystals Structure of Cobalt- Peptide Deformylase Bound to Formate
39. 6jfs: K4U Bound Crystal Structure of Class II Peptide Deformylase from Methicillin Resistant Staphylococcus Aureus
40. 1y6h: Crystal Structure of Lipdf
41. 6jfd: K1U Bound Crystal Structure of Class I Type B Peptide Deformylase from Pseudomonas Aeruginosa
42. 6jfe: K2U Bound Crystal Structure of Class I Type B Peptide Deformylase from Pseudomonas Aeruginosa
43. 1zxz: X-ray Structure of Peptide Deformylase from Arabidopsis Thaliana (ATPDF1A); Crystals Grown in Peg-5000 Mme as Precipitant
44. 1zy0: X-ray Structure of Peptide Deformylase from Arabidopsis Thaliana (ATPDF1A); Crystals Grown in Peg-6000
45. 1zy1: X-ray Structure of Peptide Deformylase from Arabidopsis Thaliana (ATPDF1A) in Complex with Met-ala-ser
46. 2ai7: S.pneumoniae Polypeptide Deformylase Complexed with Sb- 485345
47. 2ai8: E.coli Polypeptide Deformylase Complexed with Sb-485343
48. 2ai9: S.aureus Polypeptide Deformylase
49. 2aia: S.pneumoniae Pdf Complexed with Sb-543668
50. 2aie: S.pneumoniae Polypeptide Deformylase Complexed with Sb- 505684
51. 6jeu: K1U Bound Crystal Peptide Deformylase from Acinetobacter Baumanii
52. 6jev: K2U Bound Crystal Structure of Class I Type a Peptide Deformylase from Acinetobacter Baumanii
53. 2os3: Structures of Actinonin Bound Peptide Deformylases from E. Faecalis and S. Pyogenes
54. 2os1: Structures of Actinonin Bound Peptide Deformylases from E. Faecalis and S. Pyogenes
55. 2os0: Structures of Actinonin Bound Peptide Deformylases from E. Faecalis and S. Pyogenes
56. 2okl: Crystal Structure of Peptide Deformylase 2 with Actinonin from Bacillus Cereus
57. 2ew5: Structure of Helicobacter Pylori Peptide Deformylase in Complex with Inhibitor
58. 2ew6: Structure of Helicobacter Pylori Peptide Deformylase in Complex with Inhibitor
59. 2ew7: Crystal Structure of Helicobacter Pylori Peptide Deformylase
60. 2kmn: Solution Structure of Peptide Deformylase Complexed with Actinonin
61. 3l87: The Crystal Structure of Smu.143c from Streptococcus Mutans Ua159
62. 3m6o: Crystal Structure of Arabidopsis Thaliana Peptide Deformylase 1b (ATPDF1B)
63. 3m6p: Crystal Structure of Arabidopsis Thaliana Peptide Deformylase 1b (ATPDF1B) in Complex with Actinonin
64. 3m6q: Crystal Structure of Arabidopsis Thaliana Peptide Deformylase 1b (ATPDF1B) G41Q Mutant in Complex with Actinonin
65. 3m6r: Crystal Structure of Arabidopsis Thaliana Peptide Deformylase 1b (ATPDF1B) G41M Mutant in Complex with Actinonin
66. 3qu1: Peptide Deformylase from Vibrio Cholerae
67. 6jer: Apo Crystal Structure of Class I Type a Peptide Deformylase from Acinetobacter Baumannii
68. 3o3j: Crystal Structure of Arabidopsis Thaliana Peptide Deformylase 1b (ATPDF1B) in Complex with Inhibitor 6b
69. 3pn2: Crystal Structure of Arabidopsis Thaliana Petide Deformylase 1b (ATPDF1B) (crystallized in Peg-550-mme)
70. 3pn3: Crystal Structure of Arabidopsis Thaliana Petide Deformylase 1b (ATPDF1B) in Complex with Inhibitor 21
71. 3pn4: Crystal Structure of Arabidopsis Thaliana Petide Deformylase 1b (ATPDF1B) in Complex with Actinonin (crystallized in Peg-550-mme)
72. 3pn5: Crystal Structure of Arabidopsis Thaliana Petide Deformylase 1b (ATPDF1B) G41Q Mutant
73. 3pn6: Crystal Structure of Arabidopsis Thaliana Petide Deformylase 1b (ATPDF1B) G41M Mutant
74. 3str: Strep Peptide Deformylase with a Time Dependent Thiazolidine Hydroxamic Acid
75. 3svj: Strep Peptide Deformylase with a Time Dependent Thiazolidine Amide
76. 3sw8: Strep Peptide Deformylase with a Time Dependent Dichlorobenzamide- Reverse Hydroxamic Acid
77. 6jfa: Met-ala-ser Bound Crystal Structure of Class I Type B Peptide Deformylase from Pseudomonas Aeruginosa
78. 3u04: Crystal Structure of Peptide Deformylase from Ehrlichia Chaffeensis in Complex with Actinonin
79. 6ow7: X-ray Structure of Polypeptide Deformylase with a Piperazic Acid
80. 6ow2: X-ray Structure of Polypeptide Deformylase
81. 4al2: Peptide Deformylase (ni-form) with Hydrosulfide
82. 4al3: Peptide Deformylase (co-form) with Mecaptoethanol
83. 4eox: X-ray Structure of Polypeptide Deformylase Bound to a Acylprolinamide Inhibitor
84. 3u7k: Crystal Structures of The Staphylococcus Aureus Peptide Deformylase in Complex with Two Classes of New Inhibitors
85. 3u7l: Crystal Structures of The Staphylococcus Aureus Peptide Deformylase in Complex with Two Classes of New Inhibitors
86. 3u7m: Crystal Structures of The Staphylococcus Aureus Peptide Deformylase in Complex with Two Classes of New Inhibitors
87. 3u7n: Crystal Structures of The Staphylococcus Aureus Peptide Deformylase in Complex with Two Classes of New Inhibitors
88. 4az4: E.coli Deformylase with Co(ii) and Hydrosulfide
89. 6j45: Crystal Structure of E. Coli Peptide Deformylase Enzyme and Chaperone Trigger Factor Fitted into The Cryo-em Density Map of The Complex
90. 6jfc: Actinonin Bound Crystal Structure of Class I Type B Peptide Deformylase from Pseudomonas Aeruginosa
91. 6izi: Crystal Structure of E. Coli Peptide Deformylase and Methionine Aminopeptidase Fitted into The Cryo-em Density Map of The Complex
92. 6iy7: E. Coli Peptide Deformylase Crystal Structure Fitted into The Cryo-em Density Map of E. Coli 70s Ribosome in Complex with Peptide Deformylase
93. 6il2: K4U Complex Structure of Peptide Deformylase from Xanthomonas Oryzae Pv. Oryzae
94. 6il0: K3U Complex Structure of Peptide Deformylase from Xanthomonas Oryzae Pv. Oryzae
95. 6iky: K2U Complex Structure of Peptide Deformylase from Xanthomonas Oryzae Pv. Oryzae
96. 6ikt: K1U Complex Structure of Peptide Deformylase from Xanthomonas Oryzae Pv. Oryzae
97. 6jfr: K3U Bound Crystal Structure of Class II Peptide Deformylase from Methicillin Resistant Staphylococcus Aureus
98. 4dr9: Crystal Structure of a Peptide Deformylase from Synechococcus Elongatus in Complex with Actinonin
99. 4dr8: Crystal Structure of a Peptide Deformylase from Synechococcus Elongatus
100. 4e9a: Structure of Peptide Deformylase Form Helicobacter Pylori in Complex with Inhibitor
101. 4e9b: Structure of Peptide Deformylase Form Helicobacter Pylori in Complex with Actinonin
102. 6ck7: Crystal Structure of a Peptide Deformylase from Legionella Pneumophila Bound to Actinonin
103. 6caz: Crystal Structure of a Peptide Deformylase from Legionella Pneumophila
104. 6jf9: Apo Crystal Structure of Class I Type B Peptide Deformylase from Pseudomonas Aeruginosa
105. 4je6: Crystal Structure of a Human-like Mitochondrial Peptide Deformylase
106. 4je7: Crystal Structure of a Human-like Mitochondrial Peptide Deformylase in Complex with Actinonin
107. 4je8: Crystal Structure of a Human-like Mitochondrial Peptide Deformylase in Complex with Met-ala-ser
108. 6jfn: K4U Bound Crystal Structure of Class I Type B Peptide Deformylase from Pseudomonas Aeruginosa
109. 6jf3: Actinonin Bound Crystal Structure of Class I Type B Peptide Deformylase from Acinetobacter Baumannii
110. 6jf4: K1U Bound Crystal Structure of Class I Type B Peptide Deformylase from Acinetobacter Baumannii
111. 6jf5: K2U Bound Crystal Structure of Class I Type B Peptide Deformylase from Acinetobacter Baumannii
112. 6jf6: Met-ala-ser Bound Crystal Structure of Class I Type B Peptide Deformylase from Acinetobacter Baumannii
113. 6jf7: K3U Bound Crystal Structure of Class I Type B Peptide Deformylase from Acinetobacter Baumannii
114. 6jf8: K4U Bound Crystal Structure of Class I Type B Peptide Deformylase from Acinetobacter Baumannii
115. 5vcp: Crystal Structure of a Peptide Deformylase from Burkholderia Xenovorans in Complex with Actinonin
116. 4nt8: Formyl-methionine-alanine Complex Structure of Peptide Deformylase from Xanthomoonas Oryzae Pv. Oryzae
117. 5t8z: Crystal Structure of a Peptide Deformylase from Burkholderia Multivorans in Complex with Actinonin
118. 5kob: Crystal Structure of a Peptide Deformylase from Burkholderia Xenovorans
119. 5jf8: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Inhibitor Ras358 (21)
120. 5jf7: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Inhibitor Smp289
121. 5jf6: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Inhibitor 6b (ab47)
122. 5jf5: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Inhibitor At020
123. 5jf4: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Inhibitor At019
124. 5jf3: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Inhibitor At018
125. 5jf2: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Inhibitor At002
126. 5jf1: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Actinonin
127. 5jf0: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Tripeptide Met-ala-arg
128. 5jez: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae in Complex with Tripeptide Met-ala-ser
129. 5jey: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae, Crystallized in Cacodylate Buffer
130. 5jex: Crystal Structure of Type 2 Pdf from Streptococcus Agalactiae, Crystallized in Imidazole Buffer
131. 5j46: Crystal Structure of a Peptide Deformylase from Burkholderia Multivorans
132. 5i2b: Crystal Structure of a Peptide Deformylase from Burkholderia Ambifaria with Actinonin
133. 5hgw: Crystal Structure of a Peptide Deformylase from Burkholderia Ambifaria
134. 5e5d: Native Structure of Xoo1075, a Peptide Deformylase from Xanthomonas Oryzae Pv. Oryzae
135. 5cy8: Structure of Xoo1075, a Peptide Deformylase from Xanthomonas Oryzae Pv Oryze, in Complex with Fragment 244
136. 5cy7: Structure of Xoo1075, a Peptide Deformylase from Xanthomonas Oryze Pv Oryze, in Complex with Fragment 275
137. 5cxj: Structure of Xoo1075, a Peptide Deformylase from Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124
138. 5cx0: Structure of Xoo1075, a Peptide Deformylase from Xanthomonas Oryzae Pv. Oryzae, in Complex with Fragment 322
139. 5cwy: Structure of Xoo1075, a Peptide Deformylase from Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83
140. 5cwx: Structure of Xoo1075, a Peptide Deformylase from Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 134
141. 5cvq: Structure of Xoo1075, a Peptide Deformylase from Xanthomonas Oryzae Pv Oryzae, in Complex with Actinonin
142. 5cvp: Structure of Xoo1075, a Peptide Deformylase from Xanthomonas Oryzae Pv Oryze, in Complex with Fragment 571
143. 5cvk: Structure of Xoo1075, a Peptide Deformyase from Xanthomonas Oryzae Pv. Oryze, in Complex with Fragment 493
144. 5cpd: Methionine-alanine Complex Structure of Peptide Deformylase from Xanthomonas Oryzae Pv. Oryzae
145. 5cp0: Mas Complex Structure of Peptide Deformylase from Xanthomonas Oryzae Pv Oryzae
146. 4wxk: Crystal Structure of a Peptide Deformylase from Haemophilus Influenzae
147. 4wxl: Crystal Structure of a Peptide Deformylase from Haemophilus Influenzae Complex with Actinonin